Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61bQ9CQS8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Gm2594-201ENSMUST00000214774 742 ntBASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Gm30025-201ENSMUST00000218555 728 ntBASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Mtag2-201ENSMUST00000058665 714 ntBASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Gm9987-201ENSMUST00000069768 567 ntBASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sec61bQ9CQS8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Sec61bQ9CQS8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Sec61bQ9CQS8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm20472-201ENSMUST00000174403 1240 ntBASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Odf3b-204ENSMUST00000227834 930 ntBASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Gm45560-201ENSMUST00000211492 1472 ntBASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Sec61bQ9CQS8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Gm34220-201ENSMUST00000223001 2709 ntBASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Gm42545-201ENSMUST00000202755 922 ntBASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Sec61bQ9CQS8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Sec61bQ9CQS8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms