Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Lsm7Q9CQQ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm7Q9CQQ8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm7Q9CQQ8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm7Q9CQQ8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Lsm7Q9CQQ8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm7Q9CQQ8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Lsm7Q9CQQ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Mir7071-201ENSMUST00000184847 69 ntBASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm7Q9CQQ8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm7Q9CQQ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm7Q9CQQ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm7Q9CQQ8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm7Q9CQQ8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm7Q9CQQ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms