Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.56□□□□□ -0.24
Chchd1Q9CQA6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chchd1Q9CQA6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Gm11687-201ENSMUST00000118911 886 ntBASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chchd1Q9CQA6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chchd1Q9CQA6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.52□□□□□ -0.24
Chchd1Q9CQA6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chchd1Q9CQA6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chchd1Q9CQA6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chchd1Q9CQA6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms