Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim33Q99PP7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim33Q99PP7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.69■□□□□ 0.42
Trim33Q99PP7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.69■□□□□ 0.42
Trim33Q99PP7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.69■□□□□ 0.42
Trim33Q99PP7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim33Q99PP7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.68■□□□□ 0.42
Trim33Q99PP7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim33Q99PP7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.68■□□□□ 0.42
Trim33Q99PP7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim33Q99PP7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim33Q99PP7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.66■□□□□ 0.42
Trim33Q99PP7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim33Q99PP7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim33Q99PP7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim33Q99PP7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim33Q99PP7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms