Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.08■■□□□ 1.13
Trim34aQ99PP6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim34aQ99PP6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim34aQ99PP6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Gm10013-201ENSMUST00000106074 672 ntBASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Gm42922-201ENSMUST00000195887 2078 ntBASIC22.07■■□□□ 1.12
Trim34aQ99PP6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Mir5130-201ENSMUST00000175160 84 ntBASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Gm18032-201ENSMUST00000222541 538 ntBASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Trim34aQ99PP6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Gm23634-201ENSMUST00000175071 91 ntBASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Gm7367-201ENSMUST00000057611 492 ntBASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Trim34aQ99PP6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim34aQ99PP6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Gm10418-201ENSMUST00000100943 576 ntBASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim34aQ99PP6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim34aQ99PP6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim34aQ99PP6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Dapk1-207ENSMUST00000226059 5009 ntBASIC22■■□□□ 1.11
Trim34aQ99PP6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Trim34aQ99PP6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC22■■□□□ 1.11
Trim34aQ99PP6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Gm10819-201ENSMUST00000099988 561 ntBASIC22■■□□□ 1.11
Trim34aQ99PP6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim34aQ99PP6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms