Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdh23Q99PF4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdh23Q99PF4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gm27389-201ENSMUST00000183622 195 ntBASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh23Q99PF4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh23Q99PF4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Gm5864-201ENSMUST00000202263 970 ntBASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh23Q99PF4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Gm13884-201ENSMUST00000118103 829 ntBASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Gm18733-201ENSMUST00000173950 856 ntBASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.27■□□□□ 0.52
Cdh23Q99PF4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh23Q99PF4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh23Q99PF4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh23Q99PF4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Golph3-202ENSMUST00000226517 2359 ntBASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh23Q99PF4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms