Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh4Q99MT2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.42■□□□□ 0.38
Msh4Q99MT2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.42■□□□□ 0.38
Msh4Q99MT2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Msh4Q99MT2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.41■□□□□ 0.38
Msh4Q99MT2 Fst-202ENSMUST00000223640 2612 ntBASIC17.41■□□□□ 0.38
Msh4Q99MT2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Msh4Q99MT2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Msh4Q99MT2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Msh4Q99MT2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Msh4Q99MT2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Msh4Q99MT2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Msh4Q99MT2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.39■□□□□ 0.37
Msh4Q99MT2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Msh4Q99MT2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Msh4Q99MT2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Msh4Q99MT2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.37■□□□□ 0.37
Msh4Q99MT2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Msh4Q99MT2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Msh4Q99MT2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms