Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tlr3Q99MB1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.2■□□□□ 0.66
Tlr3Q99MB1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tlr3Q99MB1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.19■□□□□ 0.66
Tlr3Q99MB1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.19■□□□□ 0.66
Tlr3Q99MB1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Tlr3Q99MB1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tlr3Q99MB1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tlr3Q99MB1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.15■□□□□ 0.66
Tlr3Q99MB1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tlr3Q99MB1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tlr3Q99MB1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms