Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scrt1Q99M85 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gm27741-201ENSMUST00000185060 237 ntBASIC15.65■□□□□ 0.1
Scrt1Q99M85 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scrt1Q99M85 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.64■□□□□ 0.09
Scrt1Q99M85 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.63■□□□□ 0.09
Scrt1Q99M85 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Scrt1Q99M85 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Scrt1Q99M85 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Scrt1Q99M85 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Gm42545-201ENSMUST00000202755 922 ntBASIC15.61■□□□□ 0.09
Scrt1Q99M85 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.61■□□□□ 0.09
Scrt1Q99M85 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.61■□□□□ 0.09
Scrt1Q99M85 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Scrt1Q99M85 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms