Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdk9Q99J95 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdk9Q99J95 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk9Q99J95 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk9Q99J95 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk9Q99J95 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cdk9Q99J95 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Gm43017-201ENSMUST00000198296 752 ntBASIC18.01■□□□□ 0.47
Cdk9Q99J95 Gm43173-201ENSMUST00000202246 593 ntBASIC18.01■□□□□ 0.47
Cdk9Q99J95 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdk9Q99J95 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdk9Q99J95 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdk9Q99J95 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18■□□□□ 0.47
Cdk9Q99J95 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cdk9Q99J95 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.99■□□□□ 0.47
Cdk9Q99J95 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.99■□□□□ 0.47
Cdk9Q99J95 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk9Q99J95 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.98■□□□□ 0.47
Cdk9Q99J95 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.98■□□□□ 0.47
Cdk9Q99J95 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk9Q99J95 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.97■□□□□ 0.47
Cdk9Q99J95 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cdk9Q99J95 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.96■□□□□ 0.47
Cdk9Q99J95 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk9Q99J95 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdk9Q99J95 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdk9Q99J95 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk9Q99J95 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms