Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Gm9987-201ENSMUST00000069768 567 ntBASIC21.13■□□□□ 0.97
Col20a1Q923P0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col20a1Q923P0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col20a1Q923P0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Gm7977-201ENSMUST00000193787 748 ntBASIC21.12■□□□□ 0.97
Col20a1Q923P0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col20a1Q923P0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col20a1Q923P0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Gm4974-201ENSMUST00000209974 875 ntBASIC21.1■□□□□ 0.97
Col20a1Q923P0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col20a1Q923P0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col20a1Q923P0 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.09■□□□□ 0.97
Col20a1Q923P0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col20a1Q923P0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.08■□□□□ 0.97
Col20a1Q923P0 Gm11539-201ENSMUST00000119837 557 ntBASIC21.08■□□□□ 0.97
Col20a1Q923P0 Gm13436-201ENSMUST00000120418 567 ntBASIC21.08■□□□□ 0.97
Col20a1Q923P0 Gm13559-201ENSMUST00000120476 863 ntBASIC21.08■□□□□ 0.97
Col20a1Q923P0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Col20a1Q923P0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col20a1Q923P0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col20a1Q923P0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.08■□□□□ 0.96
Col20a1Q923P0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col20a1Q923P0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Gm29791-202ENSMUST00000207888 369 ntBASIC21.07■□□□□ 0.96
Col20a1Q923P0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.07■□□□□ 0.96
Col20a1Q923P0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col20a1Q923P0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Col20a1Q923P0 Gm12085-201ENSMUST00000119263 940 ntBASIC21.06■□□□□ 0.96
Col20a1Q923P0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.06■□□□□ 0.96
Col20a1Q923P0 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.06■□□□□ 0.96
Col20a1Q923P0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Col20a1Q923P0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col20a1Q923P0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.06■□□□□ 0.96
Col20a1Q923P0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms