Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Flg-201ENSMUST00000050758 1488 ntBASIC20.56■□□□□ 0.88
Smc1bQ920F6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gm30025-201ENSMUST00000218555 728 ntBASIC20.56■□□□□ 0.88
Smc1bQ920F6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smc1bQ920F6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Gm11927-201ENSMUST00000118472 759 ntBASIC20.55■□□□□ 0.88
Smc1bQ920F6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.55■□□□□ 0.88
Smc1bQ920F6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smc1bQ920F6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.54■□□□□ 0.88
Smc1bQ920F6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.54■□□□□ 0.88
Smc1bQ920F6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.53■□□□□ 0.88
Smc1bQ920F6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.53■□□□□ 0.88
Smc1bQ920F6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.53■□□□□ 0.88
Smc1bQ920F6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smc1bQ920F6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.52■□□□□ 0.88
Smc1bQ920F6 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.52■□□□□ 0.88
Smc1bQ920F6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smc1bQ920F6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smc1bQ920F6 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Smc1bQ920F6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Smc1bQ920F6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Gm6659-201ENSMUST00000174752 547 ntBASIC20.51■□□□□ 0.87
Smc1bQ920F6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smc1bQ920F6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms