Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha9Q91Y11 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Pcdha9Q91Y11 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha9Q91Y11 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdha9Q91Y11 Gm5643-201ENSMUST00000117081 966 ntBASIC19.02■□□□□ 0.64
Pcdha9Q91Y11 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha9Q91Y11 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha9Q91Y11 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.02■□□□□ 0.63
Pcdha9Q91Y11 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Pcdha9Q91Y11 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha9Q91Y11 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha9Q91Y11 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha9Q91Y11 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Nrn1-203ENSMUST00000223611 1443 ntBASIC19■□□□□ 0.63
Pcdha9Q91Y11 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Gm10418-201ENSMUST00000100943 576 ntBASIC19■□□□□ 0.63
Pcdha9Q91Y11 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 H2-K2-201ENSMUST00000174250 1049 ntBASIC19■□□□□ 0.63
Pcdha9Q91Y11 Spcs1-207ENSMUST00000228767 1008 ntBASIC19■□□□□ 0.63
Pcdha9Q91Y11 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha9Q91Y11 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha9Q91Y11 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha9Q91Y11 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha9Q91Y11 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha9Q91Y11 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms