Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Timm23-208ENSMUST00000226683 750 ntBASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Odf3b-204ENSMUST00000227834 930 ntBASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb18Q91Y02 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb18Q91Y02 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.66■□□□□ 0.58
Pcdhb18Q91Y02 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb18Q91Y02 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb18Q91Y02 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb18Q91Y02 Grk6-206ENSMUST00000224995 2971 ntBASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb18Q91Y02 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms