Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb20Q91XZ9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb20Q91XZ9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb20Q91XZ9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Gm37720-201ENSMUST00000195497 1241 ntBASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb20Q91XZ9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb20Q91XZ9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb20Q91XZ9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb20Q91XZ9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms