Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb3Q91XZ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Gm27801-201ENSMUST00000184174 223 ntBASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb3Q91XZ7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb3Q91XZ7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb3Q91XZ7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb3Q91XZ7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb3Q91XZ7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms