Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Gm26571-201ENSMUST00000181399 666 ntBASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb4Q91XZ6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb4Q91XZ6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Gm22325-201ENSMUST00000158904 308 ntBASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb4Q91XZ6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb4Q91XZ6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb4Q91XZ6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb4Q91XZ6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Gm10849-201ENSMUST00000100397 618 ntBASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Tgds-204ENSMUST00000228543 1594 ntBASIC17.7■□□□□ 0.42
Pcdhb4Q91XZ6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb4Q91XZ6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb4Q91XZ6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms