Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Gm12933-201ENSMUST00000120203 872 ntBASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhga11Q91XY8 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhga11Q91XY8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhga11Q91XY8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhga11Q91XY8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhga11Q91XY8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhga11Q91XY8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhga11Q91XY8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhga11Q91XY8 Gm6365-201ENSMUST00000054711 744 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms