Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhgb2Q91XX7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhgb2Q91XX7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhgb2Q91XX7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhgb2Q91XX7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhgb2Q91XX7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhgb2Q91XX7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms