Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm15378-201ENSMUST00000121894 207 ntBASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Gm22325-201ENSMUST00000158904 308 ntBASIC20.46■□□□□ 0.87
Ddx41Q91VN6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ddx41Q91VN6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.45■□□□□ 0.86
Ddx41Q91VN6 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ddx41Q91VN6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ddx41Q91VN6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ddx41Q91VN6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Mir7071-201ENSMUST00000184847 69 ntBASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ddx41Q91VN6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.41■□□□□ 0.86
Ddx41Q91VN6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ddx41Q91VN6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ddx41Q91VN6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx41Q91VN6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ddx41Q91VN6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms