Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.4■□□□□ 0.06
Tram1Q91V04 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tram1Q91V04 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Tram1Q91V04 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.4■□□□□ 0.06
Tram1Q91V04 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Gm5812-201ENSMUST00000061073 957 ntBASIC15.4■□□□□ 0.06
Tram1Q91V04 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.4■□□□□ 0.06
Tram1Q91V04 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tram1Q91V04 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.4■□□□□ 0.06
Tram1Q91V04 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.4■□□□□ 0.06
Tram1Q91V04 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tram1Q91V04 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tram1Q91V04 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tram1Q91V04 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.39■□□□□ 0.05
Tram1Q91V04 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.39■□□□□ 0.05
Tram1Q91V04 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tram1Q91V04 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.39■□□□□ 0.05
Tram1Q91V04 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tram1Q91V04 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.38■□□□□ 0.05
Tram1Q91V04 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tram1Q91V04 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tram1Q91V04 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.37■□□□□ 0.05
Tram1Q91V04 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.37■□□□□ 0.05
Tram1Q91V04 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tram1Q91V04 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.36■□□□□ 0.05
Tram1Q91V04 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tram1Q91V04 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms