Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Gm7290-201ENSMUST00000104990 617 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Gm12918-201ENSMUST00000120234 636 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Gm15710-201ENSMUST00000121821 636 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Gm5075-201ENSMUST00000196916 622 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H1fooQ8VIK3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H1fooQ8VIK3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Gm6211-202ENSMUST00000167849 925 ntBASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Gm7291-201ENSMUST00000199147 382 ntBASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
H1fooQ8VIK3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
H1fooQ8VIK3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H1fooQ8VIK3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Gm27405-201ENSMUST00000184201 112 ntBASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H1fooQ8VIK3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H1fooQ8VIK3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms