Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 Mir8098-201ENSMUST00000184011 137 ntBASIC15.38■□□□□ 0.05
Cspg4Q8VHY0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Gm29518-201ENSMUST00000190858 372 ntBASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cspg4Q8VHY0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Birc2-201ENSMUST00000054878 378 ntBASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Cspg4Q8VHY0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Mir3081-201ENSMUST00000175305 84 ntBASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cspg4Q8VHY0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Gm27459-201ENSMUST00000184860 107 ntBASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cspg4Q8VHY0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.33■□□□□ 0.05
Cspg4Q8VHY0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg4Q8VHY0 Mir5130-201ENSMUST00000175160 84 ntBASIC15.33■□□□□ 0.05
Cspg4Q8VHY0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cspg4Q8VHY0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cspg4Q8VHY0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cspg4Q8VHY0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cspg4Q8VHY0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms