Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rab40cQ8VHQ4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rab40cQ8VHQ4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rab40cQ8VHQ4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Gm12821-201ENSMUST00000120022 600 ntBASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rab40cQ8VHQ4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rab40cQ8VHQ4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms