Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cgref1Q8R1U2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cgref1Q8R1U2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cgref1Q8R1U2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cgref1Q8R1U2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cgref1Q8R1U2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cgref1Q8R1U2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cgref1Q8R1U2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cgref1Q8R1U2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cgref1Q8R1U2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cgref1Q8R1U2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms