Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ebf4Q8K4J2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf4Q8K4J2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Idnk-204ENSMUST00000226010 1898 ntBASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf4Q8K4J2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Rps24-207ENSMUST00000224568 714 ntBASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.28■□□□□ 0.2
Ebf4Q8K4J2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Gm9959-201ENSMUST00000068277 390 ntBASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Ebf4Q8K4J2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.27■□□□□ 0.19
Ebf4Q8K4J2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf4Q8K4J2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms