Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.89■□□□□ 0.29
Clrn1Q8K445 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn1Q8K445 Grk6-206ENSMUST00000224995 2971 ntBASIC16.89■□□□□ 0.29
Clrn1Q8K445 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.88■□□□□ 0.29
Clrn1Q8K445 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Flg-201ENSMUST00000050758 1488 ntBASIC16.87■□□□□ 0.29
Clrn1Q8K445 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn1Q8K445 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Gm2559-201ENSMUST00000201323 363 ntBASIC16.86■□□□□ 0.29
Clrn1Q8K445 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Clrn1Q8K445 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.85■□□□□ 0.29
Clrn1Q8K445 Gm12441-201ENSMUST00000121806 588 ntBASIC16.85■□□□□ 0.29
Clrn1Q8K445 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.85■□□□□ 0.29
Clrn1Q8K445 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clrn1Q8K445 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.84■□□□□ 0.29
Clrn1Q8K445 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clrn1Q8K445 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms