Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgcs1Q8JZK9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgcs1Q8JZK9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgcs1Q8JZK9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgcs1Q8JZK9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgcs1Q8JZK9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgcs1Q8JZK9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hmgcs1Q8JZK9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms