Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhb7Q8CDY9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb7Q8CDY9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Fst-202ENSMUST00000223640 2612 ntBASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb7Q8CDY9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb7Q8CDY9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb7Q8CDY9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb7Q8CDY9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb7Q8CDY9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb7Q8CDY9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.88■□□□□ 0.45
Pcdhb7Q8CDY9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms