Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 Dio3-201ENSMUST00000097228 1449 ntBASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc178Q8CDV0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc178Q8CDV0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc178Q8CDV0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Gm2399-201ENSMUST00000104944 225 ntBASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc178Q8CDV0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc178Q8CDV0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Gm10812-201ENSMUST00000099864 546 ntBASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc178Q8CDV0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc178Q8CDV0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc178Q8CDV0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc178Q8CDV0 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Gm11249-201ENSMUST00000117071 859 ntBASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc178Q8CDV0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms