Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc38Q8CDN8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc38Q8CDN8 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.83■□□□□ 0.76
Ccdc38Q8CDN8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc38Q8CDN8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc38Q8CDN8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc38Q8CDN8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc38Q8CDN8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Gm27405-201ENSMUST00000184201 112 ntBASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc38Q8CDN8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc38Q8CDN8 Idnk-204ENSMUST00000226010 1898 ntBASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Gm38285-201ENSMUST00000192928 922 ntBASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc38Q8CDN8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Gm26524-201ENSMUST00000192339 390 ntBASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc38Q8CDN8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms