Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vcpip1Q8CDG3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vcpip1Q8CDG3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Vcpip1Q8CDG3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Vcpip1Q8CDG3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Vcpip1Q8CDG3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcpip1Q8CDG3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcpip1Q8CDG3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcpip1Q8CDG3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcpip1Q8CDG3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcpip1Q8CDG3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Vcpip1Q8CDG3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms