Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Lysmd4Q8CC84 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lysmd4Q8CC84 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Gm22325-201ENSMUST00000158904 308 ntBASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lysmd4Q8CC84 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lysmd4Q8CC84 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Gm43017-201ENSMUST00000198296 752 ntBASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.04■□□□□ 0.16
Lysmd4Q8CC84 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lysmd4Q8CC84 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms