Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.29■□□□□ 0.36
SynpoQ8CC35 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.29■□□□□ 0.36
SynpoQ8CC35 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Gm12896-201ENSMUST00000118430 226 ntBASIC17.28■□□□□ 0.36
SynpoQ8CC35 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Gm2559-201ENSMUST00000201323 363 ntBASIC17.28■□□□□ 0.36
SynpoQ8CC35 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.28■□□□□ 0.36
SynpoQ8CC35 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.28■□□□□ 0.36
SynpoQ8CC35 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynpoQ8CC35 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.27■□□□□ 0.36
SynpoQ8CC35 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.27■□□□□ 0.36
SynpoQ8CC35 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynpoQ8CC35 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.27■□□□□ 0.36
SynpoQ8CC35 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
SynpoQ8CC35 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynpoQ8CC35 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.25■□□□□ 0.35
SynpoQ8CC35 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SynpoQ8CC35 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.25■□□□□ 0.35
SynpoQ8CC35 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.25■□□□□ 0.35
SynpoQ8CC35 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Gm27275-201ENSMUST00000184318 272 ntBASIC17.25■□□□□ 0.35
SynpoQ8CC35 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynpoQ8CC35 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.24■□□□□ 0.35
SynpoQ8CC35 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms