Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc46a2Q8CA03 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc46a2Q8CA03 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Gm13534-201ENSMUST00000121169 513 ntBASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc46a2Q8CA03 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc46a2Q8CA03 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.16■□□□□ 0.34
Slc46a2Q8CA03 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Gm6139-201ENSMUST00000079261 882 ntBASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc46a2Q8CA03 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc46a2Q8CA03 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc46a2Q8CA03 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms