Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Alx1Q8C8B0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Alx1Q8C8B0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Alx1Q8C8B0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Gm12382-201ENSMUST00000122005 922 ntBASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Alx1Q8C8B0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Alx1Q8C8B0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Alx1Q8C8B0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Alx1Q8C8B0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Alx1Q8C8B0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Alx1Q8C8B0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.88■□□□□ 0.93
Alx1Q8C8B0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Alx1Q8C8B0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms