Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
Uba3Q8C878 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Uba3Q8C878 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uba3Q8C878 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uba3Q8C878 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uba3Q8C878 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Uba3Q8C878 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.83■□□□□ 0.6
Uba3Q8C878 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Uba3Q8C878 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Uba3Q8C878 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.82■□□□□ 0.6
Uba3Q8C878 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
Uba3Q8C878 Gm13158-201ENSMUST00000122007 736 ntBASIC18.82■□□□□ 0.6
Uba3Q8C878 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.82■□□□□ 0.6
Uba3Q8C878 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Uba3Q8C878 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Uba3Q8C878 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.81■□□□□ 0.6
Uba3Q8C878 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.81■□□□□ 0.6
Uba3Q8C878 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Uba3Q8C878 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Uba3Q8C878 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Uba3Q8C878 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
Uba3Q8C878 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Uba3Q8C878 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.8■□□□□ 0.6
Uba3Q8C878 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.8■□□□□ 0.6
Uba3Q8C878 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Uba3Q8C878 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.8■□□□□ 0.6
Uba3Q8C878 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.79■□□□□ 0.6
Uba3Q8C878 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
Uba3Q8C878 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Uba3Q8C878 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Uba3Q8C878 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.78■□□□□ 0.6
Uba3Q8C878 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Gm5643-201ENSMUST00000117081 966 ntBASIC18.78■□□□□ 0.6
Uba3Q8C878 Gm13168-201ENSMUST00000121771 632 ntBASIC18.78■□□□□ 0.6
Uba3Q8C878 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Uba3Q8C878 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Uba3Q8C878 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Uba3Q8C878 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Uba3Q8C878 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Uba3Q8C878 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Uba3Q8C878 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.77■□□□□ 0.6
Uba3Q8C878 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Uba3Q8C878 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Uba3Q8C878 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Uba3Q8C878 Gm10138-203ENSMUST00000206952 366 ntBASIC18.77■□□□□ 0.6
Uba3Q8C878 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms