Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Mtag2-201ENSMUST00000058665 714 ntBASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim9Q8C7M3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Mir2861-201ENSMUST00000175539 82 ntBASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim9Q8C7M3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim9Q8C7M3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim9Q8C7M3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Gm11249-201ENSMUST00000117071 859 ntBASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim9Q8C7M3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim9Q8C7M3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms