Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap54Q8C6S9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap54Q8C6S9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap54Q8C6S9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap54Q8C6S9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap54Q8C6S9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Gm34391-201ENSMUST00000203706 907 ntBASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Gm18115-201ENSMUST00000221209 621 ntBASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap54Q8C6S9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 AW822252-206ENSMUST00000208904 237 ntBASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap54Q8C6S9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap54Q8C6S9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Gm21559-201ENSMUST00000220638 855 ntBASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Gm8587-201ENSMUST00000076538 843 ntBASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap54Q8C6S9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Gm7370-201ENSMUST00000219471 767 ntBASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfap54Q8C6S9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Gm9013-201ENSMUST00000132939 882 ntBASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap54Q8C6S9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.14■□□□□ 0.34
Cfap54Q8C6S9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Cfap54Q8C6S9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cfap54Q8C6S9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms