Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ska3Q8C263 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.82■□□□□ 0.28
Ska3Q8C263 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ska3Q8C263 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ska3Q8C263 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.81■□□□□ 0.28
Ska3Q8C263 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.81■□□□□ 0.28
Ska3Q8C263 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ska3Q8C263 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.8■□□□□ 0.28
Ska3Q8C263 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Gm11927-201ENSMUST00000118472 759 ntBASIC16.8■□□□□ 0.28
Ska3Q8C263 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ska3Q8C263 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Ska3Q8C263 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ska3Q8C263 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ska3Q8C263 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ska3Q8C263 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.78■□□□□ 0.28
Ska3Q8C263 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.78■□□□□ 0.28
Ska3Q8C263 Gm37856-201ENSMUST00000191634 999 ntBASIC16.78■□□□□ 0.28
Ska3Q8C263 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ska3Q8C263 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ska3Q8C263 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ska3Q8C263 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.77■□□□□ 0.28
Ska3Q8C263 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Ska3Q8C263 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.77■□□□□ 0.28
Ska3Q8C263 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.77■□□□□ 0.28
Ska3Q8C263 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Gm11249-201ENSMUST00000117071 859 ntBASIC16.77■□□□□ 0.28
Ska3Q8C263 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Gm27275-201ENSMUST00000184318 272 ntBASIC16.77■□□□□ 0.28
Ska3Q8C263 Trmt13-210ENSMUST00000198454 880 ntBASIC16.77■□□□□ 0.28
Ska3Q8C263 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ska3Q8C263 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ska3Q8C263 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ska3Q8C263 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.77■□□□□ 0.27
Ska3Q8C263 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ska3Q8C263 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ska3Q8C263 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.77■□□□□ 0.27
Ska3Q8C263 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ska3Q8C263 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.76■□□□□ 0.27
Ska3Q8C263 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ska3Q8C263 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms