Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trub1Q8C0D0 Idnk-204ENSMUST00000226010 1898 ntBASIC18.46■□□□□ 0.54
Trub1Q8C0D0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
Trub1Q8C0D0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trub1Q8C0D0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trub1Q8C0D0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trub1Q8C0D0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Gm2559-201ENSMUST00000201323 363 ntBASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trub1Q8C0D0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Mtag2-201ENSMUST00000058665 714 ntBASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trub1Q8C0D0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.41■□□□□ 0.54
Trub1Q8C0D0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trub1Q8C0D0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trub1Q8C0D0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trub1Q8C0D0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trub1Q8C0D0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trub1Q8C0D0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.4■□□□□ 0.54
Trub1Q8C0D0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trub1Q8C0D0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.39■□□□□ 0.54
Trub1Q8C0D0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trub1Q8C0D0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trub1Q8C0D0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trub1Q8C0D0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms