Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Gm3375-201ENSMUST00000203929 796 ntBASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Sh3rf2Q8BZT2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3rf2Q8BZT2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3rf2Q8BZT2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3rf2Q8BZT2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Gm10517-202ENSMUST00000192970 758 ntBASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3rf2Q8BZT2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3rf2Q8BZT2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.08■□□□□ 0.49
Sh3rf2Q8BZT2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3rf2Q8BZT2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3rf2Q8BZT2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Sh3rf2Q8BZT2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3rf2Q8BZT2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms