Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp43Q8BUM9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp43Q8BUM9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp43Q8BUM9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp43Q8BUM9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Gm11249-201ENSMUST00000117071 859 ntBASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp43Q8BUM9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.07■□□□□ 0.48
Usp43Q8BUM9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp43Q8BUM9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp43Q8BUM9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Usp43Q8BUM9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.04■□□□□ 0.48
Usp43Q8BUM9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.04■□□□□ 0.48
Usp43Q8BUM9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms