Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.35■□□□□ 0.53
Suds3Q8BR65 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Suds3Q8BR65 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.34■□□□□ 0.53
Suds3Q8BR65 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.34■□□□□ 0.53
Suds3Q8BR65 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Suds3Q8BR65 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.34■□□□□ 0.53
Suds3Q8BR65 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Suds3Q8BR65 Gm7290-201ENSMUST00000104990 617 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Gm12918-201ENSMUST00000120234 636 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Gm15710-201ENSMUST00000121821 636 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Gm5075-201ENSMUST00000196916 622 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Suds3Q8BR65 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.33■□□□□ 0.52
Suds3Q8BR65 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Suds3Q8BR65 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.32■□□□□ 0.52
Suds3Q8BR65 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Suds3Q8BR65 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Suds3Q8BR65 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.3■□□□□ 0.52
Suds3Q8BR65 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.3■□□□□ 0.52
Suds3Q8BR65 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.3■□□□□ 0.52
Suds3Q8BR65 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Suds3Q8BR65 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.3■□□□□ 0.52
Suds3Q8BR65 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Suds3Q8BR65 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Gm12441-201ENSMUST00000121806 588 ntBASIC18.29■□□□□ 0.52
Suds3Q8BR65 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.29■□□□□ 0.52
Suds3Q8BR65 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms