Protein–RNA interactions for Protein: Q8BMQ2

Gtf3c4, General transcription factor 3C polypeptide 4, mousemouse

Known RBP Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4Q8BMQ2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c4Q8BMQ2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c4Q8BMQ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf3c4Q8BMQ2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf3c4Q8BMQ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Gtf3c4Q8BMQ2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Trmt13-210ENSMUST00000198454 880 ntBASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf3c4Q8BMQ2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gtf3c4Q8BMQ2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gtf3c4Q8BMQ2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Gtf3c4Q8BMQ2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms