Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Samm50Q8BGH2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Samm50Q8BGH2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Samm50Q8BGH2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Samm50Q8BGH2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Samm50Q8BGH2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Samm50Q8BGH2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Samm50Q8BGH2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Gm12441-201ENSMUST00000121806 588 ntBASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Samm50Q8BGH2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Samm50Q8BGH2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.89■□□□□ 0.94
Samm50Q8BGH2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms