Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm12527-201ENSMUST00000117967 564 ntBASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Mtag2-201ENSMUST00000058665 714 ntBASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Atg4bQ8BGE6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Atg4bQ8BGE6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Atg4bQ8BGE6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Gm11249-201ENSMUST00000117071 859 ntBASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Gm27275-201ENSMUST00000184318 272 ntBASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Atg4bQ8BGE6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Atg4bQ8BGE6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.81■□□□□ 0.28
Atg4bQ8BGE6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Atg4bQ8BGE6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms