Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Tgds-204ENSMUST00000228543 1594 ntBASIC17.61■□□□□ 0.41
Ubp1Q811S7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubp1Q811S7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ubp1Q811S7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Ubp1Q811S7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.59■□□□□ 0.41
Ubp1Q811S7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.59■□□□□ 0.41
Ubp1Q811S7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ubp1Q811S7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ubp1Q811S7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubp1Q811S7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubp1Q811S7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubp1Q811S7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.58■□□□□ 0.4
Ubp1Q811S7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.58■□□□□ 0.4
Ubp1Q811S7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubp1Q811S7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubp1Q811S7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ubp1Q811S7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
Ubp1Q811S7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubp1Q811S7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms