Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim50Q810I2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim50Q810I2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim50Q810I2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim50Q810I2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim50Q810I2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim50Q810I2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim50Q810I2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim50Q810I2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim50Q810I2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim50Q810I2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.41■□□□□ 0.38
Trim50Q810I2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim50Q810I2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim50Q810I2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Flg-201ENSMUST00000050758 1488 ntBASIC17.4■□□□□ 0.38
Trim50Q810I2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Trim50Q810I2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.4■□□□□ 0.38
Trim50Q810I2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.4■□□□□ 0.38
Trim50Q810I2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trim50Q810I2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim50Q810I2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim50Q810I2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim50Q810I2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim50Q810I2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Gm12441-201ENSMUST00000121806 588 ntBASIC17.39■□□□□ 0.37
Trim50Q810I2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.39■□□□□ 0.37
Trim50Q810I2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.39■□□□□ 0.37
Trim50Q810I2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.39■□□□□ 0.37
Trim50Q810I2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim50Q810I2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.39■□□□□ 0.37
Trim50Q810I2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms