Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trnp1Q80ZI1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Gm7213-201ENSMUST00000215977 950 ntBASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trnp1Q80ZI1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Gm11355-201ENSMUST00000121120 306 ntBASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.24■□□□□ 0.83
Trnp1Q80ZI1 Gm10418-201ENSMUST00000100943 576 ntBASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trnp1Q80ZI1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trnp1Q80ZI1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Gm27357-201ENSMUST00000183754 135 ntBASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Il3ra-202ENSMUST00000223589 738 ntBASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trnp1Q80ZI1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Gm13401-201ENSMUST00000117074 291 ntBASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Gm11950-201ENSMUST00000121615 838 ntBASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trnp1Q80ZI1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Mir3081-201ENSMUST00000175305 84 ntBASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trnp1Q80ZI1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trnp1Q80ZI1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms